| 1 | 2000 | Faught, M.K. and J.M. Latvis | PaleoAucilla Prehistory Project: Underwater Prehistoric Archaeology in Apalachee Bay 1999 Report. | With Contributions by Rachel Horlings, Lori Jacobs, Michael Lavender, Charles Lawson, Kathryn McClure, Daria Merwin, Thadra Palmer, and Ariana Slemmens. |
| 2 | NA | Meide, Chuck and Damour, Melanie | Report on Operations in the St. Marks River 1998 and background PUA Research Reports No. 2 | Never added |
| 3 | 2000 | Damour, Melanie and Michael K. Faught | Report on the Survey of the Historic Wreck Located Near the St. Marks Lighthouse | Meide, Chuck, James McClean, and Edward Wiser |
| 4 | 2000 | Meide, Chuck, James McClean, and Edward Wiser | Dog Island Shipwreck Survey 1999: Report of Historical and Archaeological Investigations, | Edited by Michael K. Faught, Jennifer McKinnon, William Hoffman, and Joseph M. Latvis |
| 5 | 2001 | William Brian Yates, John P. Kilgo and Melanie Damour | The Wakulla Springs Sand Relocation Project 1998 and 1999 Wakulla County, Florida | Compiled and Edited By Kathryn McClure, Melanie Damour, and Michael K. Faught PUA Research Reports No. 5 (30pp). |
| 6 | 2001 | Carter, Brinnen and Palmer, Thadra | Preliminary Report on Two Shipwreck Sites in the Entrances to Boot Key Harbor | |
| 7 | 2001 | Faught, Michael K., John P. Kilgo and Melanie Damour | Report on the Shipwreck and Biological Survey Conducted Near Fleming Key, 17-20 March 1998 | |
| 8 | 2000 | Faught, Michael K., Melanie Damour and Thadra .Palmer Stanton | Preliminary Report for the Survey of Man of War Harbor, Fleming Key in the Florida Keys National Marine Sanctuary | |
| 9 | 2001 | Damour, Melanie and Christopher Horrell | Dog Island Shipwreck Survey Report of Field Operation: 26 June – 4 August, 2000 | |
| 10 | 2001 | Horrell, Christopher, | City of Hawkinsville Archaeological Assessment 11-Feburary, 2000 to 12-Feburary, 2000 | |
| 11 | 2001 | Marks, Brian | City of Hawkinsville Archaeological Assessment | |
| 12 | 2001 | Grayson, Ronald, Arbuthnot, Michael and Gokay Zuleyha | Report on the Shipwreck and Biological Survey Conducted on the Coast of Flemming Key, March 10-12, 2001 | |
| 13 | 2001 | Latvis, Joseph and Michael K. Faught | PaleoAucilla Prehistory Project: Underwater Prehistoric Archaeology in Apalachee Bay 2000 Interim Report. | |
| 14 | 2001 | Damour, Melanie and Christopher Horrell | Dog and St. George Islands Shipwreck Survey 2001 Report. | |
| 15 | 2002 | Tobon, Maria Camila and Ryan Pendleton | Report of 2001 Field Operations, PaleoAucilla Prehistory Project, Underwater Prehistoric Archaeology in Apalachee Bay, June 25th through August 3rd 2001 | |
| 16 | 2002 | Horlings, Rachel and Marc Galloway | The Wreck of the SS Tarpon | |
| 17 | 2002 | Hoffman, William | Dog Island Shipwreck Survey, Report of Field Operations: Springs 2001 | |
| 18 | 2002 | Tobon, Camila Maria | Side Scan Survey Offshore of the Big Bend: An Exercise in Ground-truthing March 14-17, 2002. | |
| 19 | 2002 | Whitney Anderson and Julia Giblin | S.S. Tarpon: 2003 Field Report | |
| 20 | | | | |